{
  "_notes": [
    "Bundle-backed variant of tabular_smoke: the dataset arrives as smoke.hdb",
    "rather than as loose files. mount='data' places the bundle's smoke/labels.csv",
    "at data/smoke/labels.csv, which is what metadata_csv below expects."
  ],
  "run_name": "tabular_bundle",
  "num_classes": 2,
  "split_identity_level": 1,
  "eval_stage": "cd_fuse",
  "save_predictions": true,
  "seed": 1234,
  "folds": 3,
  "fold_seed": 100,
  "output_root": "results",
  "data": {
    "module": "hypertower_core.profiles.generic",
    "args": {
      "metadata_csv": "data/smoke/labels.csv",
      "id_column": "sample_id",
      "label_col": "diagnosis",
      "target_type": "classification",
      "group_column": "patient_id",
      "cat_cols": [
        "site"
      ],
      "exclude_cols": [
        "notes"
      ]
    }
  },
  "towers": [
    {
      "name": "cd",
      "module": "hypertower_core.components.towers.clinical_tower",
      "class": "ClinicalEncoder",
      "data_source": "matrix",
      "args": {
        "hidden_dim": 64
      }
    }
  ],
  "stages": [
    {
      "name": "cd_warm",
      "type": "warm",
      "tower": "cd",
      "head_name": "cd_aux",
      "level": "sample",
      "epochs": 8
    },
    {
      "name": "cd_aux",
      "type": "head",
      "input": "cd",
      "train_with": "cd_fuse"
    },
    {
      "name": "cd_fuse",
      "type": "fusion",
      "module": "hypertower_core.components.bridges.mono_bridge",
      "class": "MonoBridge",
      "inputs": [
        "cd"
      ],
      "level": "sample",
      "epochs": 10,
      "train_towers": true,
      "args": {
        "use_ln": false
      }
    }
  ],
  "training": {
    "lr": 0.001,
    "batch_size": 32,
    "tune_binary_threshold": true
  },
  "data_bundles": [
    {
      "file": "smoke.hdb",
      "encrypted": false,
      "mount": "data",
      "unpacked_mb": 1,
      "sha256": "b01dbf19fe3639a1b75fb80d75b31158f78dc42bec3767fe1caf94afd5b8fda5"
    }
  ],
  "dataset": {
    "n_samples": 400
  }
}