Add new regression and ensemble experiment configurations for V2-M and OrthoBridge

- Introduced multiple regression experiment configurations targeting vf_md, including:
  - cd_solo_reg_set.json: CD tower only regression setup.
  - img_solo_reg_set.json: Image tower only regression setup.
  - reg_head_epoch_sweep.json: Baseline regression sweeps at different epochs (50, 75, 100).
  - reg_head_set.json: Various regression setups including baseline and OrthoBridge configurations.
  - single_eye_reg.json: Single-eye regression setup for worst-eye aggregation analysis.

- Added ensemble configurations for OrthoBridge with different inner bridges:
  - ortho_alts_ensemble.json: Ensemble tests with ConcatBridge, PairwiseAdditiveBridge, and GatedAdditiveBridge.
  - ortho_alts_tritower.json: Tritower tests with the same inner bridges.

- Created V2-M specific configurations:
  - baseline_reg_nt50.json: Regression baseline with V2-M backbone.
  - geom_vec_gt.json and geom_vec_unet.json: Geometry vector injection experiments with V2-M.
  - single_l1_bridges.json: Single-eye ensemble experiments with various bridge types.
  - tritower_geom_gt.json: Tritower setup with GT contour-rasterized masks.

- Promoted existing experiments to higher repetitions for robustness.
This commit is contained in:
rpotter6298
2026-06-11 15:08:20 +02:00
parent 32a801a572
commit 280060db82
343 changed files with 8558 additions and 57747 deletions
+27
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#!/usr/bin/env bash
set -euo pipefail
cd "$(dirname "$0")/../.."
PYTHON_BIN="${PYTHON_BIN:-/home/rpotter/miniconda3/envs/fundus_imaging/bin/python}"
export MPLCONFIGDIR="${MPLCONFIGDIR:-/tmp/mplconfig}"
FUSION_SPLIT="${FUSION_SPLIT:-test}"
GRADCAM_GRID="${GRADCAM_GRID:-16}"
GRADCAM_ALPHA="${GRADCAM_ALPHA:-0.45}"
FUSION_SOURCE="${FUSION_SOURCE:-v3}"
GRADCAM_SOURCE="${GRADCAM_SOURCE:-v3}"
echo "Running F8a fusion event panel from ${FUSION_SOURCE} ${FUSION_SPLIT} predictions..."
"${PYTHON_BIN}" -m v4.figures.F8_explainability \
--only-fusion \
--fusion-source "${FUSION_SOURCE}" \
--fusion-split "${FUSION_SPLIT}"
echo "Running oriented GradCAM outputs from ${GRADCAM_SOURCE}..."
"${PYTHON_BIN}" -m v4.figures.F8_explainability \
--only-gradcam \
--gradcam-source "${GRADCAM_SOURCE}" \
--n-grid "${GRADCAM_GRID}" \
--alpha "${GRADCAM_ALPHA}"