Add initial R project file for xMap biomarker analysis

2026-05-12 11:01:52 +02:00
commit 7b124dbe07
29 changed files with 15190 additions and 0 deletions
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+import pandas as pd
+antigen_list = pd.read_excel("data/02a.AP0211_GLA02_SBA01_Antigen_list.xlsx")
+gene_names = antigen_list["Gene name"].tolist()
+#remove nans
+gene_names = [gene for gene in gene_names if pd.notna(gene)]
+gene_names_split = [gene.split(",") for gene in gene_names]
+gene_names = [gene for sublist in gene_names_split for gene in sublist]
+len(set(gene_names))