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hypertower/v3/classes/towers.py
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2026-03-19 16:58:29 +01:00

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from __future__ import annotations
import math
from typing import Optional
import torch
from torch import nn
from torchvision import transforms
from v3.classes.backbones import BACKBONES, list_names, load_backbone_weights
from v3.classes.SE_attention import SEBlock
from v3.classes.data_bundle import DataBundle
def build_backbone(name: str, freeze_ratio: float = 0.0, augment: bool = True):
"""
Operational builder:
- instantiate with DEFAULT weights
- strip classifier → features
- apply ratio-based freezing over coarse blocks
- return (model, out_dim, transform)
"""
key = (name or "").lower()
if key not in BACKBONES:
raise ValueError(f"Unsupported backbone '{name}'. Valid options: {list_names()}")
spec = BACKBONES[key]
m = spec.ctor(weights=spec.weights_default)
out_dim, m = spec.strip(m)
load_backbone_weights(key, m)
# transforms: use the weights mean/std, but keep your augmentation pipeline
mean = getattr(spec.weights_default, "meta", {}).get("mean", (0.485, 0.456, 0.406))
std = getattr(spec.weights_default, "meta", {}).get("std", (0.229, 0.224, 0.225))
crop = 299 if key == "inception_v3" else 224
if augment:
transform = transforms.Compose(
[
transforms.Resize(256),
transforms.CenterCrop(crop),
transforms.RandomHorizontalFlip(),
transforms.RandomVerticalFlip(),
transforms.RandomRotation(15),
transforms.ColorJitter(0.1, 0.1, 0.1, 0.05),
transforms.ToTensor(),
transforms.Normalize(mean=mean, std=std),
]
)
else:
transform = transforms.Compose(
[
transforms.Resize(256),
transforms.CenterCrop(crop),
transforms.ToTensor(),
transforms.Normalize(mean=mean, std=std),
]
)
# ratio-based freezing: freeze earliest floor(N * freeze_ratio) blocks
fr = max(0.0, min(1.0, float(freeze_ratio)))
blocks = spec.blocks(m)
n = len(blocks)
freeze_n = int(math.floor(n * fr))
for b in blocks[:freeze_n]:
for p in b.parameters():
p.requires_grad = False
return m, out_dim, transform
class ImageTower(nn.Module):
"""
Vision backbone → pooled features.
- backbone: one of list_names() (default 'efficientnet_b0')
- always DEFAULT torchvision weights
- freeze_ratio ∈ [0,1] freezes earliest floor(N*freeze_ratio) blocks
- returns [N, out_dim] features from backbone forward
"""
def __init__(
self,
backbone: str = "efficientnet_b0",
freeze_ratio: float = 0.0,
use_se: bool = False,
se_reduction: int = 16,
se_pre_norm: bool = True,
augment: bool = True,
geometry_dim: int = 0,
):
super().__init__()
self.backbone, base_dim, self.transform = build_backbone(
backbone, freeze_ratio, augment=augment
)
self._name = backbone
# Keep ordered blocks for dynamic freezing/thawing
key = (self._name or "").lower()
self._spec = BACKBONES[key]
self._blocks = self._spec.blocks(self.backbone)
# Optional tower-level SE over the final feature vector
self.base_dim = base_dim
self.geometry_dim = max(0, int(geometry_dim))
self.out_dim = self.base_dim + self.geometry_dim
self.tower_ln = nn.LayerNorm(self.base_dim) if se_pre_norm else nn.Identity()
self.tower_se = (
SEBlock(self.base_dim, reduction=se_reduction, residual=True)
if use_se
else None
)
def forward(
self, x: torch.Tensor, geometry: Optional[torch.Tensor] = None
) -> torch.Tensor:
y = self.backbone(x)
# sanity: pooled features, not logits
assert y.dim() == 2 and y.size(1) == self.base_dim, (
f"Expected features [N,{self.base_dim}], got {tuple(y.shape)}"
)
if self.tower_se is not None:
y, _ = self.tower_se(self.tower_ln(y))
if self.geometry_dim > 0:
if geometry is None or geometry.numel() == 0:
geom = torch.zeros(
y.size(0), self.geometry_dim, device=y.device, dtype=y.dtype
)
else:
if geometry.dim() == 1:
geom = geometry.unsqueeze(0)
else:
geom = geometry
geom = geom.to(device=y.device, dtype=y.dtype)
if geom.size(0) != y.size(0):
raise ValueError(
f"Geometry batch size mismatch: {geom.size(0)} vs {y.size(0)}"
)
if geom.size(1) != self.geometry_dim:
raise ValueError(
f"Expected geometry dim {self.geometry_dim}, got {geom.size(1)}"
)
y = torch.cat([y, geom], dim=1)
return y
def set_freeze_ratio(self, ratio: float):
"""Dynamically freeze earliest floor(N*ratio) backbone blocks."""
r = max(0.0, min(1.0, float(ratio)))
n = len(self._blocks)
freeze_n = int(math.floor(n * r))
# Unfreeze all first
for b in self._blocks:
for p in b.parameters():
p.requires_grad = True
# Freeze earliest blocks
for b in self._blocks[:freeze_n]:
for p in b.parameters():
p.requires_grad = False
class SiameseImageTower(nn.Module):
"""
Shared-weight bilateral image tower.
Runs OD and OS images through a single shared backbone, then returns
cat([f_mean, f_delta]) where:
f_mean = (f_od + f_os) / 2 -- shared bilateral representation
f_delta = f_od - f_os -- asymmetry, signed OD-relative
out_dim = 2 * backbone_out_dim
When x_os is None (single-eye fallback):
f_mean = f_od
f_delta = zeros
so the module degrades gracefully when only one eye is available.
The shared backbone means both eyes contribute to every gradient update,
effectively doubling the training signal for the visual pathway without
doubling parameters.
"""
def __init__(
self,
backbone: str = "efficientnet_b0",
freeze_ratio: float = 0.0,
use_se: bool = False,
se_reduction: int = 16,
se_pre_norm: bool = True,
augment: bool = True,
):
super().__init__()
self._tower = ImageTower(
backbone=backbone,
freeze_ratio=freeze_ratio,
use_se=use_se,
se_reduction=se_reduction,
se_pre_norm=se_pre_norm,
augment=augment,
geometry_dim=0,
)
self.out_dim = self._tower.out_dim * 2
self.transform = self._tower.transform
def forward(
self,
x_od: torch.Tensor,
x_os: Optional[torch.Tensor] = None,
) -> torch.Tensor:
f_od = self._tower(x_od)
if x_os is None:
f_mean = f_od
f_delta = torch.zeros_like(f_od)
else:
f_os = self._tower(x_os)
f_mean = (f_od + f_os) * 0.5
f_delta = f_od - f_os
return torch.cat([f_mean, f_delta], dim=1)
def set_freeze_ratio(self, ratio: float) -> None:
"""Delegates to the shared inner tower."""
self._tower.set_freeze_ratio(ratio)
class ClinicalTower(nn.Module):
"""MLP over DataBundle.vectorize_row outputs (convert to torch inside tower)."""
def __init__(
self,
clinical_data: DataBundle,
hidden_dim: int = 128,
dropout: float = 0.1,
use_se: bool = False,
se_reduction: int = 16,
se_pre_norm: bool = True,
):
super().__init__()
self.feature_dim = clinical_data.feature_dim
self.out_dim = hidden_dim
# two-block MLP so we can optionally freeze/thaw per block
self.block0 = nn.Sequential(
nn.Linear(self.feature_dim, hidden_dim),
nn.LayerNorm(hidden_dim),
nn.ReLU(inplace=True),
nn.Dropout(dropout),
)
self.block1 = nn.Sequential(
nn.Linear(hidden_dim, hidden_dim),
nn.ReLU(inplace=True),
)
self.net = nn.Sequential(self.block0, self.block1)
self.tower_ln = nn.LayerNorm(hidden_dim) if se_pre_norm else nn.Identity()
self.tower_se = (
SEBlock(hidden_dim, reduction=se_reduction, residual=True)
if use_se
else None
)
def forward(self, meta_np_or_torch) -> torch.Tensor:
if isinstance(meta_np_or_torch, torch.Tensor):
x = meta_np_or_torch
else:
x = torch.as_tensor(meta_np_or_torch, dtype=torch.float32)
h = self.net(x)
if self.tower_se is not None:
h, _ = self.tower_se(self.tower_ln(h))
return h
def set_freeze_ratio(self, ratio: float):
"""Optionally freeze earliest blocks of the MLP."""
r = max(0.0, min(1.0, float(ratio)))
# Unfreeze all
for p in self.block0.parameters():
p.requires_grad = True
for p in self.block1.parameters():
p.requires_grad = True
# Freeze earliest blocks based on ratio threshold
if r >= 0.5:
for p in self.block0.parameters():
p.requires_grad = False
if r >= 1.0:
for p in self.block1.parameters():
p.requires_grad = False