rpotter6298
138 lines
3.4 KiB
Python
138 lines
3.4 KiB
Python
from .network_manager import (
|
|
FoldResult,
|
|
LoaderBundle,
|
|
NetworkManager,
|
|
PatientSplit,
|
|
)
|
|
from .split_manager import (
|
|
PatientFirstSplitManager,
|
|
SplitPlan,
|
|
build_patient_split_plans,
|
|
)
|
|
from .profiles import (
|
|
DatasetProfile,
|
|
SimpleDatasetProfile,
|
|
SlotDescriptor,
|
|
PapilaProfile,
|
|
build_papila_profile,
|
|
)
|
|
from .loader_factory import SlotLoaderFactory
|
|
from .slot_dataset import SlotDataset, slot_collate
|
|
from .papila_data import PapilaData
|
|
from .papila_builders import build_papila_data
|
|
from .data_bundle import DataBundle
|
|
from .transforms import (
|
|
ImageTransformConfig,
|
|
backbone_transform_config,
|
|
build_backbone_transform,
|
|
build_eval_transform,
|
|
build_imagenet_transform,
|
|
ResizeTransform,
|
|
CenterCropTransform,
|
|
ROICropTransform,
|
|
JitterBundleTransform,
|
|
UnetMaskProvider,
|
|
TRANSFORM_REGISTRY,
|
|
build_transform_chain,
|
|
)
|
|
from .towerbase import TowerBase, build_backbone, train_towers_epoch, collect_probs_towers
|
|
from .image_towers import ImageEncoder, SiameseImageTower, ImageTower
|
|
from .clinical_towers import ClinicalEncoder, ClinicalDataTower
|
|
from .geometry_towers import GeometryTower
|
|
from .hypertower_models import (
|
|
SingleEyeHT,
|
|
BilateralHT,
|
|
SiameseHT,
|
|
FusedEnsembleHT,
|
|
LogitMLPEnsembleHT,
|
|
EmbeddingMLPEnsembleHT,
|
|
NTowerHT,
|
|
NLateralHT,
|
|
MonoTowerHT,
|
|
train_single_epoch,
|
|
train_bilateral_epoch,
|
|
train_siamese_epoch,
|
|
train_fusion_epoch,
|
|
train_ntower_epoch,
|
|
train_mono_epoch,
|
|
collect_probs_classic,
|
|
collect_probs_ensemble,
|
|
collect_probs_bilateral,
|
|
collect_probs_siamese,
|
|
collect_probs_ntower,
|
|
collect_probs_mono,
|
|
V2ModeComparisonOps,
|
|
)
|
|
from .bridges import Bridge, HTClassifier, HyperBridge, VoteBridge
|
|
from .hypertower_logger import HypertowerLogger
|
|
|
|
__all__ = [
|
|
"NetworkManager",
|
|
"PatientSplit",
|
|
"LoaderBundle",
|
|
"FoldResult",
|
|
"PatientFirstSplitManager",
|
|
"SplitPlan",
|
|
"build_patient_split_plans",
|
|
"DatasetProfile",
|
|
"SimpleDatasetProfile",
|
|
"SlotDescriptor",
|
|
"PapilaProfile",
|
|
"build_papila_profile",
|
|
"PapilaData",
|
|
"build_papila_data",
|
|
"DataBundle",
|
|
"SlotLoaderFactory",
|
|
"SlotDataset",
|
|
"slot_collate",
|
|
"ImageTransformConfig",
|
|
"backbone_transform_config",
|
|
"build_backbone_transform",
|
|
"build_eval_transform",
|
|
"build_imagenet_transform",
|
|
"ResizeTransform",
|
|
"CenterCropTransform",
|
|
"ROICropTransform",
|
|
"JitterBundleTransform",
|
|
"UnetMaskProvider",
|
|
"TRANSFORM_REGISTRY",
|
|
"build_transform_chain",
|
|
"TowerBase",
|
|
"build_backbone",
|
|
"train_towers_epoch",
|
|
"collect_probs_towers",
|
|
"ImageEncoder",
|
|
"SiameseImageTower",
|
|
"ImageTower",
|
|
"ClinicalEncoder",
|
|
"ClinicalDataTower",
|
|
"GeometryTower",
|
|
"SingleEyeHT",
|
|
"BilateralHT",
|
|
"SiameseHT",
|
|
"FusedEnsembleHT",
|
|
"LogitMLPEnsembleHT",
|
|
"EmbeddingMLPEnsembleHT",
|
|
"NTowerHT",
|
|
"NLateralHT",
|
|
"MonoTowerHT",
|
|
"train_single_epoch",
|
|
"train_bilateral_epoch",
|
|
"train_siamese_epoch",
|
|
"train_fusion_epoch",
|
|
"train_ntower_epoch",
|
|
"train_mono_epoch",
|
|
"collect_probs_classic",
|
|
"collect_probs_ensemble",
|
|
"collect_probs_bilateral",
|
|
"collect_probs_siamese",
|
|
"collect_probs_ntower",
|
|
"collect_probs_mono",
|
|
"Bridge",
|
|
"HTClassifier",
|
|
"HyperBridge",
|
|
"VoteBridge",
|
|
"V2ModeComparisonOps",
|
|
"HypertowerLogger",
|
|
]
|